9NIG | pdb_00009nig

PB TCR in complex with HLA-DR4 presenting citrullinated Tenascin C peptide

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyMHC antigen-recognition domain 8040455 3000521 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054671 3000071 SCOP2B (2022-06-29)
F [auth C]SCOP2B SuperfamilyMHC antigen-recognition domain 8040455 3000521 SCOP2B (2022-06-29)
F [auth C]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054671 3000071 SCOP2B (2022-06-29)
K [auth H]SCOP2B SuperfamilyMHC antigen-recognition domain 8040455 3000521 SCOP2B (2022-06-29)
K [auth H]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054671 3000071 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
F [auth C],
K [auth H]		PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domainDomain
A,
F [auth C],
K [auth H]		PF00993Class II histocompatibility antigen, alpha domain (MHC_II_alpha)Class II histocompatibility antigen, alpha domainDomain
B,
G [auth D],
L [auth I]		PF00969Class II histocompatibility antigen, beta domain (MHC_II_beta)Class II histocompatibility antigen, beta domainDomain
B,
G [auth D],
L [auth I]		PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
F [auth C],
K [auth H]		HLA class II histocompatibility antigen, DR alpha chain
B,
G [auth D],
L [auth I]		HLA class II histocompatibility antigen DR beta chain-
C [auth M],
H [auth E],
M [auth J]		PB TCR alpha chain---
D [auth N],
I [auth F],
N [auth K]		PB TCR beta chain---
E [auth P],
J [auth G],
O [auth L]		Tenascin

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
F [auth C],
K [auth H]		IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A,
F [auth C],
K [auth H]		IPR050160Major Histocompatibility Complex/ImmunoglobulinFamily
A,
F [auth C],
K [auth H]		IPR003597Immunoglobulin C1-setDomain
A,
F [auth C],
K [auth H]		IPR011162MHC classes I/II-like antigen recognition proteinHomologous Superfamily
A,
F [auth C],
K [auth H]		IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
A,
F [auth C],
K [auth H]		IPR014745MHC class II, alpha/beta chain, N-terminalHomologous Superfamily
A,
F [auth C],
K [auth H]		IPR013783Immunoglobulin-like foldHomologous Superfamily
A,
F [auth C],
K [auth H]		IPR007110Immunoglobulin-like domainDomain
A,
F [auth C],
K [auth H]		IPR001003MHC class II, alpha chain, N-terminalDomain
B,
G [auth D],
L [auth I]		IPR000353MHC class II, beta chain, N-terminalDomain
B,
G [auth D],
L [auth I]		IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
B,
G [auth D],
L [auth I]		IPR050160Major Histocompatibility Complex/ImmunoglobulinFamily
B,
G [auth D],
L [auth I]		IPR014745MHC class II, alpha/beta chain, N-terminalHomologous Superfamily
B,
G [auth D],
L [auth I]		IPR003597Immunoglobulin C1-setDomain
B,
G [auth D],
L [auth I]		IPR013783Immunoglobulin-like foldHomologous Superfamily
B,
G [auth D],
L [auth I]		IPR011162MHC classes I/II-like antigen recognition proteinHomologous Superfamily
B,
G [auth D],
L [auth I]		IPR007110Immunoglobulin-like domainDomain
B,
G [auth D],
L [auth I]		IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
E [auth P],
J [auth G],
O [auth L]		IPR041161Tenascin, EGF-like domainDomain
E [auth P],
J [auth G],
O [auth L]		IPR014716Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Homologous Superfamily
E [auth P],
J [auth G],
O [auth L]		IPR000742EGF-like domainDomain
E [auth P],
J [auth G],
O [auth L]		IPR002181Fibrinogen, alpha/beta/gamma chain, C-terminal globular domainDomain
E [auth P],
J [auth G],
O [auth L]		IPR003961Fibronectin type IIIDomain
E [auth P],
J [auth G],
O [auth L]		IPR013111Epidermal growth factor-like domain, extracellularDomain
E [auth P],
J [auth G],
O [auth L]		IPR050991Extracellular Matrix Regulatory ProteinsFamily
E [auth P],
J [auth G],
O [auth L]		IPR013783Immunoglobulin-like foldHomologous Superfamily
E [auth P],
J [auth G],
O [auth L]		IPR036056Fibrinogen-like, C-terminalHomologous Superfamily
E [auth P],
J [auth G],
O [auth L]		IPR036116Fibronectin type III superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A,
F [auth C],
K [auth H]		Pharos:  P01903
E [auth P],
J [auth G],
O [auth L]		Pharos:  P24821

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
E [auth P],
J [auth G],
O [auth L]		CIR Parent Component: ARG

RESID:  AA0214

PSI-MOD :  L-citrulline MOD:00219