2LVP | pdb_00002lvp

gp78CUE domain bound to the distal ubiquitin of K48-linked diubiquitin

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	50 mM TRIS, 50 mM sodium chloride	90% H2O/10% D2O		7.2	ambient	298
2	2D 1H-13C HSQC	50 mM TRIS, 50 mM sodium chloride	90% H2O/10% D2O		7.2	ambient	298
3	3D HNCO	50 mM TRIS, 50 mM sodium chloride	90% H2O/10% D2O		7.2	ambient	298
4	3D CBCA(CO)NH	50 mM TRIS, 50 mM sodium chloride	90% H2O/10% D2O		7.2	ambient	298
5	3D C(CO)NH	50 mM TRIS, 50 mM sodium chloride	90% H2O/10% D2O		7.2	ambient	298
6	3D H(CCO)NH	50 mM TRIS, 50 mM sodium chloride	90% H2O/10% D2O		7.2	ambient	298
7	3D HNCACB	50 mM TRIS, 50 mM sodium chloride	90% H2O/10% D2O		7.2	ambient	298
8	2D 1H-13C HSQC aromatic	50 mM TRIS, 50 mM sodium chloride	90% H2O/10% D2O		7.2	ambient	298
9	3D 1H-15N NOESY	50 mM TRIS, 50 mM sodium chloride	90% H2O/10% D2O		7.2	ambient	298

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	INOVA	600
2	Bruker	INOVA	700
3	Varian	INOVA	600
4	Varian	INOVA	800

NMR Refinement
Method	Details	Software
simulated annealing	FINAL STEP IN WATER	Sparky

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	200
Conformers Submitted Total Number	20
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	chemical shift assignment	Sparky		Goddard
2	peak picking	Sparky		Goddard
3	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax
4	structure solution	CNS		Alexandre Bonvin
5	refinement	X-PLOR NIH		Schwieters, Kuszewski, Tjandra and Clore