5JXV | pdb_00005jxv

Solid-state MAS NMR structure of immunoglobulin beta 1 binding domain of protein G (GB1)


SOLID-STATE NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
1(H)NCAH12.5 mM sodium phosphate, 45 % methyl-2,4-pentane diol, 22.5 % isopropyl alcohol, 800 mg/mL [U-99% 13C; U-99% 15N] B1 domain of Immunoglobulin G-Binding protein GH20/MPD/IPA12.5 mM5.6variable atm283Bruker AVANCE III 1000
11(H)N(CO)CAH12.5 mM sodium phosphate, 45 % methyl-2,4-pentane diol, 22.5 % isopropyl alcohol, 800 mg/mL [U-99% 13C; U-99% 15N] B1 domain of Immunoglobulin G-Binding protein GH20/MPD/IPA12.5 mM5.6variable atm283Bruker AVANCE III 1000
12(H)COCAH12.5 mM sodium phosphate, 45 % methyl-2,4-pentane diol, 22.5 % isopropyl alcohol, 800 mg/mL [U-99% 13C; U-99% 15N] B1 domain of Immunoglobulin G-Binding protein GH20/MPD/IPA12.5 mM5.6variable atm283Bruker AVANCE III 1000
13(H)CO(N)CAH12.5 mM sodium phosphate, 45 % methyl-2,4-pentane diol, 22.5 % isopropyl alcohol, 800 mg/mL [U-99% 13C; U-99% 15N] B1 domain of Immunoglobulin G-Binding protein GH20/MPD/IPA12.5 mM5.6variable atm283Bruker AVANCE III 1000
2(H)CANH12.5 mM sodium phosphate, 45 % methyl-2,4-pentane diol, 22.5 % isopropyl alcohol, 800 mg/mL [U-99% 13C; U-99% 15N] B1 domain of Immunoglobulin G-Binding protein GH20/MPD/IPA12.5 mM5.6variable atm283Bruker AVANCE III 1000
3(H)(CO)CA(CO)NH12.5 mM sodium phosphate, 45 % methyl-2,4-pentane diol, 22.5 % isopropyl alcohol, 800 mg/mL [U-99% 13C; U-99% 15N] B1 domain of Immunoglobulin G-Binding protein GH20/MPD/IPA12.5 mM5.6variable atm283Bruker AVANCE III 1000
4(H)(CA)CB(CA)NH12.5 mM sodium phosphate, 45 % methyl-2,4-pentane diol, 22.5 % isopropyl alcohol, 800 mg/mL [U-99% 13C; U-99% 15N] B1 domain of Immunoglobulin G-Binding protein GH20/MPD/IPA12.5 mM5.6variable atm283Bruker AVANCE III 1000
5(H)N(CA)(CO)NH12.5 mM sodium phosphate, 45 % methyl-2,4-pentane diol, 22.5 % isopropyl alcohol, 800 mg/mL [U-99% 13C; U-99% 15N] B1 domain of Immunoglobulin G-Binding protein GH20/MPD/IPA12.5 mM5.6variable atm283Bruker AVANCE III 1000
6(H)N(CO)(CA)NH12.5 mM sodium phosphate, 45 % methyl-2,4-pentane diol, 22.5 % isopropyl alcohol, 800 mg/mL [U-99% 13C; U-99% 15N] B1 domain of Immunoglobulin G-Binding protein GH20/MPD/IPA12.5 mM5.6variable atm283Bruker AVANCE III 1000
7(H)CCH-TOCSY12.5 mM sodium phosphate, 45 % methyl-2,4-pentane diol, 22.5 % isopropyl alcohol, 800 mg/mL [U-99% 13C; U-99% 15N] B1 domain of Immunoglobulin G-Binding protein GH20/MPD/IPA12.5 mM5.6variable atm283Bruker AVANCE III 1000
8(H)NHH-RFDR12.5 mM sodium phosphate, 45 % methyl-2,4-pentane diol, 22.5 % isopropyl alcohol, 800 mg/mL [U-99% 13C; U-99% 15N] B1 domain of Immunoglobulin G-Binding protein GH20/MPD/IPA12.5 mM5.6variable atm283Bruker AVANCE III 1000
9(H)CHH-RFDR12.5 mM sodium phosphate, 45 % methyl-2,4-pentane diol, 22.5 % isopropyl alcohol, 800 mg/mL [U-99% 13C; U-99% 15N] B1 domain of Immunoglobulin G-Binding protein GH20/MPD/IPA12.5 mM5.6variable atm283Bruker AVANCE III 1000
10H(H)CH-RFDR-aromatic13C12.5 mM sodium phosphate, 45 % methyl-2,4-pentane diol, 22.5 % isopropyl alcohol, 800 mg/mL [U-99% 13C; U-99% 15N] B1 domain of Immunoglobulin G-Binding protein GH20/MPD/IPA12.5 mM5.6variable atm283Bruker AVANCE III 1000
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE III1000
NMR Refinement
MethodDetailsSoftware
torsion angle dynamicsCANDID
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number80
Conformers Submitted Total Number20
Representative Model1 (target function)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1structure calculationCANDID2.6.0Herrmann, Guntert and Wuthrich
3chemical shift assignmentCARAKeller and Wuthrich
5chemical shift assignmentSparkyGoddard
6collectionTopSpinBruker Biospin
7structure calculationTALOSCornilescu, Delaglio and Bax
8processingNMRPipeDelaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax