Extremely stable monomeric variant of human cystatin C with single amino acid substitution
SOLUTION NMR - SOLUTION SCATTERING
| NMR Experiment |
|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
|---|
| 1 | 2D 1H-15N HSQC | 0.5 mM [U-99% 15N] hCC V57G | 90% H2O/10% D2O | 50 mM | 7.4 | 1 Pa | 298 | Agilent DDR2 800 |
| 2 | 2D 1H-13C HSQC | 0.5 mM [U-99% 13C; U-99% 15N] hCC V57G | 90% H2O/10% D2O | 50 mM | 7.4 | 1 Pa | 298 | Agilent DDR2 800 |
| 3 | 3D HNCO | 0.5 mM [U-99% 13C; U-99% 15N] hCC V57G | 90% H2O/10% D2O | 50 mM | 7.4 | 1 Pa | 298 | Agilent DDR2 800 |
| 4 | 3D HNCA | 0.5 mM [U-99% 13C; U-99% 15N] hCC V57G | 90% H2O/10% D2O | 50 mM | 7.4 | 1 Pa | 298 | Agilent DDR2 800 |
| 5 | 3D HN(CO)CA | 0.5 mM [U-99% 13C; U-99% 15N] hCC V57G | 90% H2O/10% D2O | 50 mM | 7.4 | 1 Pa | 298 | Agilent DDR2 800 |
| 7 | 3D CBCA(CO)NH | 0.5 mM [U-99% 13C; U-99% 15N] hCC V57G | 90% H2O/10% D2O | 50 mM | 7.4 | 1 Pa | 298 | Agilent DDR2 800 |
| 6 | 3D HBHA(CO)NH | 0.5 mM [U-99% 13C; U-99% 15N] hCC V57G | 90% H2O/10% D2O | 50 mM | 7.4 | 1 Pa | 298 | Agilent DDR2 800 |
| 8 | 3D HCCH-TOCSY | 0.5 mM [U-99% 13C; U-99% 15N] hCC V57G | 90% H2O/10% D2O | 50 mM | 7.4 | 1 Pa | 298 | Agilent DDR2 800 |
| 9 | 3D 1H-13C NOESY aliphatic | 0.5 mM [U-99% 13C; U-99% 15N] hCC V57G | 90% H2O/10% D2O | 50 mM | 7.4 | 1 Pa | 298 | Agilent DDR2 800 |
| 10 | 3D 1H-15N NOESY | 0.5 mM [U-99% 15N] hCC V57G | 90% H2O/10% D2O | 50 mM | 7.4 | 1 Pa | 298 | Agilent DDR2 800 |
| NMR Spectrometer Information |
|---|
| Spectrometer | Manufacturer | Model | Field Strength |
|---|
| 1 | Agilent | DDR2 | 800 |
| NMR Refinement |
|---|
| Method | Details | Software |
|---|
| molecular dynamics | | YASARA |
| NMR Ensemble Information |
|---|
| Conformer Selection Criteria | target function |
|---|
| Conformers Calculated Total Number | 20 |
|---|
| Conformers Submitted Total Number | 20 |
|---|
| Representative Model | 1 (target function) |
|---|
| Computation: NMR Software |
|---|
| # | Classification | Version | Software Name | Author |
|---|
| 1 | processing | NMRPipe | | Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax |
| 2 | data analysis | Sparky | | Goddard |
| 3 | peak picking | Sparky | | Goddard |
| 4 | chemical shift assignment | CS-ROSETTA | | Shen, Vernon, Baker and Bax |
| 5 | structure calculation | CYANA | | Guntert, Mumenthaler and Wuthrich |
| 6 | refinement | Xplor-NIH | | Schwieters, Kuszewski, Tjandra and Clore |
| 7 | refinement | YASARA | | Krieger E. |