7MP7 | pdb_00007mp7

Rules for designing protein fold switches and their implications for the folding code

SOLUTION NMR

NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D HSQC	0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate	95% H2O/5% D2O	100 mM	7.0	ambient	298	Bruker AVANCE DMX 600
2	3D HNCACB	0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate	95% H2O/5% D2O	100 mM	7.0	ambient	298	Bruker AVANCE DMX 600
3	3D CBCA(CO)NH	0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate	95% H2O/5% D2O	100 mM	7.0	ambient	298	Bruker AVANCE DMX 600
4	3D HNCO	0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate	95% H2O/5% D2O	100 mM	7.0	ambient	298	Bruker AVANCE DMX 600
5	3D H(CCO)NH	0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate	95% H2O/5% D2O	100 mM	7.0	ambient	298	Bruker AVANCE DMX 600
6	3D 15NNOESY	0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate	95% H2O/5% D2O	100 mM	7.0	ambient	298	Bruker AVANCE DMX 600
7	3D 13CNOESY	0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate	95% H2O/5% D2O	100 mM	7.0	ambient	298	Bruker AVANCE DMX 600
8	3D HNHA	0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate	95% H2O/5% D2O	100 mM	7.0	ambient	298	Bruker AVANCE DMX 600
9	3D C(CO)NH	0.3 mM [U-13C; U-15N] Sb3, 100 mM potassium phosphate	95% H2O/5% D2O	100 mM	7.0	ambient	298	Bruker AVANCE DMX 600

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	AVANCE DMX	600

NMR Refinement
Method	Details	Software
simulated annealing		CNS

NMR Ensemble Information
Conformer Selection Criteria	structures with the lowest energy
Conformers Calculated Total Number	1000
Conformers Submitted Total Number	10
Representative Model	1 (lowest energy)

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	refinement	CNS		Brunger A. T. et.al.
2	structure calculation	CNS		Brunger, Adams, Clore, Gros, Nilges and Read
3	chemical shift assignment	NMRFAM-SPARKY		NMRFAM
4	peak picking	NMRFAM-SPARKY		NMRFAM
5	collection	TopSpin		Bruker Biospin
6	processing	NMRPipe		Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.