Experiment: 9I4S

X-RAY DIFFRACTION

Serial Crystallography (SX)

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	6YRJ

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	BATCH MODE		291	6-10 mg/ml of protein in 50 mm sodium acetate, 150 mm NaCl pH 5 mixed with 150 mM MgCl2, 150 mm HEPES, 20 % PEG 4000, pH 7.5.

Crystal Properties
Matthews coefficient	Solvent content
2.45	49.83

Symmetry
Space Group	P 21 21 21

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	293	PIXEL	DECTRIS PILATUS3 6M		2023-02-22	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	DIAMOND BEAMLINE I24	1.000	Diamond	I24

Sample delivery method
Diffraction ID	Description	Sample Delivery Method
1		fixed target

Fixed Target
Diffraction ID	Description	Sample Holding	Support Base	Motion control	Details	Sample Solvent
1	Oxford silicon chip			Geobrick and Smaract

Measurement
Diffraction ID	Pulse Duration	Pulse Repetition Rate	Focal Spot Size	Pulse Energy	Photons Per Pulse
1	undefined (fs)			undefined (KeV)

Data Reduction
Diffraction ID	Frames Indexed	Crystal Hits	Frames Indexed	Latices Merged
1

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	CC (Half)	R Split (All)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.4	79.75	100	0.976	0.214	6.4	39.3		83011

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	CC (Half)	R Split (All)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.4	2.44			0.346	1.332

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	6yrj	2.4	79.75	83011	4198	99.995	0.189	0.188	0.1881	0.2138	0.2139	42.614

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.354			0.293		0.061

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_3_deg	14.929
r_dihedral_angle_6_deg	13.171
r_lrange_it	6.572
r_dihedral_angle_1_deg	6.167
r_dihedral_angle_2_deg	5.674
r_scangle_it	4.759
r_mcangle_it	3.345
r_scbond_it	2.877
r_mcbond_it	1.941
r_angle_refined_deg	1.217

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_3_deg	14.929
r_dihedral_angle_6_deg	13.171
r_lrange_it	6.572
r_dihedral_angle_1_deg	6.167
r_dihedral_angle_2_deg	5.674
r_scangle_it	4.759
r_mcangle_it	3.345
r_scbond_it	2.877
r_mcbond_it	1.941
r_angle_refined_deg	1.217
r_nbtor_refined	0.297
r_symmetry_nbd_refined	0.231
r_symmetry_xyhbond_nbd_refined	0.227
r_nbd_refined	0.187
r_xyhbond_nbd_refined	0.106
r_chiral_restr	0.095
r_ncsr_local_group_5	0.086
r_ncsr_local_group_11	0.086
r_ncsr_local_group_15	0.085
r_ncsr_local_group_13	0.081
r_ncsr_local_group_8	0.08
r_ncsr_local_group_14	0.08
r_ncsr_local_group_4	0.078
r_ncsr_local_group_2	0.077
r_ncsr_local_group_9	0.077
r_ncsr_local_group_12	0.077
r_ncsr_local_group_10	0.076
r_ncsr_local_group_6	0.072
r_ncsr_local_group_1	0.07
r_ncsr_local_group_3	0.07
r_ncsr_local_group_7	0.07
r_gen_planes_refined	0.004
r_bond_refined_d	0.003