GDU: GALACTOSE-URIDINE-5'-DIPHOSPHATE
GDU is a Ligand Of Interest in 2GNA designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2GNA_GDU_B_335 | 28% | 37% | 0.202 | 0.854 | 1.17 | 1.3 | 3 | 3 | 0 | 0 | 100% | 1 |
| 2GNA_GDU_A_335 | 13% | 37% | 0.235 | 0.772 | 1.16 | 1.32 | 3 | 3 | 0 | 0 | 100% | 1 |
| 3UKF_GDU_B_802 | 100% | 15% | 0.043 | 0.993 | 1.92 | 1.85 | 12 | 10 | 1 | 0 | 100% | 1 |
| 4HO9_GDU_B_300 | 99% | 24% | 0.05 | 0.983 | 1.38 | 1.71 | 4 | 9 | 0 | 0 | 100% | 1 |
| 6GX0_GDU_A_402 | 97% | 47% | 0.067 | 0.98 | 0.81 | 1.22 | 1 | 6 | 0 | 0 | 100% | 1 |
| 5M7D_GDU_A_402 | 97% | 44% | 0.071 | 0.983 | 0.91 | 1.26 | 1 | 6 | 0 | 0 | 100% | 1 |
| 7YS9_GDU_A_404 | 91% | 78% | 0.087 | 0.974 | 0.39 | 0.51 | - | 1 | 1 | 0 | 100% | 0.4 |
