GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4F97 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4F97_GDP_A_501 | 94% | 33% | 0.084 | 0.984 | 1.01 | 1.63 | 1 | 7 | 0 | 0 | 100% | 1 |
| 4F97_GDP_B_502 | 91% | 20% | 0.09 | 0.977 | 1.31 | 2.04 | 3 | 4 | 0 | 0 | 100% | 1 |
| 4F96_GDP_B_501 | 80% | 46% | 0.111 | 0.959 | 0.97 | 1.12 | 1 | 2 | 0 | 0 | 100% | 1 |
| 8IYF_GDP_B_501 | 79% | 48% | 0.112 | 0.959 | 0.92 | 1.07 | - | 2 | 1 | 0 | 100% | 1 |
| 3VDN_GDP_B_501 | 72% | 32% | 0.129 | 0.954 | 1.16 | 1.52 | 2 | 6 | 2 | 0 | 100% | 1 |
| 4F9F_GDP_B_600 | 56% | 40% | 0.164 | 0.935 | 0.94 | 1.37 | 1 | 4 | 4 | 0 | 100% | 1 |
| 8IYE_GDP_A_501 | 41% | 47% | 0.198 | 0.914 | 0.9 | 1.15 | 1 | 3 | 1 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 8QEG_GDP_A_401 | 100% | 51% | 0.031 | 0.993 | 1.02 | 0.87 | 3 | 1 | 0 | 0 | 100% | 1 |
| 8QEH_GDP_A_405 | 100% | 55% | 0.03 | 0.993 | 0.89 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9BAJ_GDP_A_203 | 100% | 41% | 0.032 | 0.994 | 1.22 | 1.1 | 2 | 2 | 1 | 0 | 100% | 1 |
