GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4J0Q designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4J0Q_GDP_D_402 | 88% | 35% | 0.112 | 0.987 | 1.25 | 1.33 | 3 | 3 | 0 | 0 | 100% | 1 |
| 4J0Q_GDP_C_402 | 84% | 44% | 0.127 | 0.989 | 1.12 | 1.03 | 3 | 2 | 2 | 0 | 100% | 1 |
| 4J0Q_GDP_B_402 | 79% | 43% | 0.134 | 0.982 | 1.06 | 1.14 | 2 | 4 | 3 | 0 | 100% | 1 |
| 4J0Q_GDP_E_402 | 77% | 45% | 0.135 | 0.975 | 0.9 | 1.21 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4J0Q_GDP_A_402 | 75% | 39% | 0.154 | 0.989 | 1.03 | 1.34 | 2 | 3 | 2 | 0 | 100% | 1 |
| 4IW3_GDP_K_402 | 68% | 38% | 0.141 | 0.954 | 0.91 | 1.48 | - | 5 | 6 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
