DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 4TNJ designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4TNJ_DGD_c_516 | 14% | 39% | 0.305 | 0.872 | 0.92 | 1.45 | 1 | 12 | 0 | 0 | 94% | 1 |
| 4TNJ_DGD_C_516 | 13% | 39% | 0.288 | 0.845 | 0.91 | 1.44 | 1 | 12 | 0 | 0 | 94% | 1 |
| 4TNJ_DGD_B_620 | 8% | 42% | 0.331 | 0.837 | 0.9 | 1.34 | 1 | 8 | 0 | 0 | 88% | 1 |
| 4TNJ_DGD_c_515 | 7% | 42% | 0.365 | 0.86 | 0.95 | 1.28 | 1 | 6 | 0 | 0 | 80% | 1 |
| 4TNJ_DGD_c_517 | 6% | 41% | 0.35 | 0.796 | 0.88 | 1.4 | - | 10 | 0 | 0 | 100% | 1 |
| 4TNJ_DGD_C_515 | 6% | 42% | 0.36 | 0.831 | 0.98 | 1.27 | 2 | 6 | 0 | 0 | 80% | 1 |
| 4TNJ_DGD_C_517 | 6% | 41% | 0.336 | 0.768 | 0.88 | 1.41 | 1 | 10 | 0 | 0 | 100% | 1 |
| 4TNJ_DGD_b_624 | 3% | 42% | 0.402 | 0.764 | 0.91 | 1.33 | 1 | 6 | 0 | 0 | 88% | 1 |
| 4TNJ_DGD_a_411 | 2% | 40% | 0.438 | 0.73 | 0.94 | 1.39 | 1 | 7 | 0 | 0 | 85% | 1 |
| 4TNJ_DGD_A_408 | 2% | 40% | 0.446 | 0.711 | 0.93 | 1.41 | - | 7 | 0 | 0 | 85% | 1 |
| 4TNJ_DGD_b_601 | 1% | 39% | 0.47 | 0.716 | 1.06 | 1.32 | 3 | 7 | 0 | 0 | 79% | 1 |
| 4TNJ_DGD_B_625 | 1% | 39% | 0.564 | 0.762 | 1.06 | 1.32 | 3 | 7 | 0 | 0 | 79% | 1 |
| 4TNJ_DGD_D_409 | 0% | 42% | 0.814 | 0.702 | 0.91 | 1.33 | - | 9 | 0 | 0 | 95% | 1 |
| 4TNJ_DGD_d_408 | 0% | 42% | 0.773 | 0.662 | 0.92 | 1.34 | 2 | 9 | 0 | 0 | 95% | 1 |
| 5GTI_DGD_h_103 | 96% | 52% | 0.05 | 0.967 | 0.89 | 0.96 | 3 | 3 | 0 | 0 | 94% | 1 |
| 5V2C_DGD_C_516 | 95% | 43% | 0.067 | 0.983 | 0.89 | 1.29 | 5 | 10 | 0 | 0 | 94% | 1 |
| 5WS6_DGD_h_103 | 92% | 53% | 0.065 | 0.968 | 0.86 | 0.96 | 3 | 3 | 0 | 0 | 94% | 1 |
| 3WU2_DGD_C_518 | 92% | 45% | 0.063 | 0.965 | 0.79 | 1.31 | 3 | 9 | 0 | 0 | 94% | 1 |
| 5B66_DGD_C_516 | 91% | 46% | 0.067 | 0.965 | 0.89 | 1.2 | 2 | 7 | 0 | 0 | 94% | 1 |
| 7M78_DGD_L_207 | 91% | 40% | 0.082 | 0.97 | 0.93 | 1.4 | 2 | 14 | 4 | 0 | 100% | 1 |
