GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4XC6 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4XC6_GDP_A_1103 | 72% | 12% | 0.149 | 0.974 | 2.72 | 1.34 | 11 | 5 | 1 | 0 | 100% | 1 |
| 4XC6_GDP_B_1102 | 46% | 12% | 0.229 | 0.966 | 2.75 | 1.33 | 11 | 5 | 1 | 0 | 100% | 1 |
| 5CJT_GDP_A_1104 | 65% | 12% | 0.161 | 0.964 | 2.74 | 1.33 | 11 | 5 | 1 | 0 | 100% | 1 |
| 5CJW_GDP_A_1104 | 65% | 12% | 0.165 | 0.968 | 2.72 | 1.34 | 10 | 5 | 2 | 0 | 100% | 1 |
| 5CJV_GDP_A_1104 | 64% | 13% | 0.164 | 0.962 | 2.72 | 1.32 | 11 | 5 | 3 | 0 | 100% | 1 |
| 5CJU_GDP_A_1104 | 60% | 12% | 0.172 | 0.958 | 2.72 | 1.34 | 10 | 5 | 1 | 0 | 100% | 1 |
| 4XC8_GDP_A_1102 | 52% | 12% | 0.195 | 0.955 | 2.73 | 1.35 | 10 | 5 | 2 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
