Ligand validation:5D8X

MPD: (4S)-2-METHYL-2,4-PENTANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5D8X_MPD_J_201	56%	72%	0.149	0.921	0.45	0.63	-	-	6	0	100%	1
5D8X_MPD_S_201	48%	82%	0.15	0.893	0.4	0.4	-	-	0	0	100%	1
5D8X_MPD_Q_202	43%	77%	0.154	0.877	0.35	0.57	-	-	1	0	100%	1
5D8X_MPD_I_202	34%	77%	0.171	0.856	0.31	0.59	-	-	0	0	100%	1
5D8X_MPD_Q_203	34%	78%	0.162	0.844	0.36	0.53	-	-	1	0	100%	1
5D8X_MPD_C_201	34%	89%	0.162	0.843	0.25	0.38	-	-	1	0	100%	1
5D8X_MPD_K_203	31%	76%	0.195	0.864	0.36	0.57	-	-	1	0	100%	1
5D8X_MPD_L_202	29%	84%	0.218	0.877	0.29	0.46	-	-	0	0	100%	1
5D8X_MPD_R_201	15%	87%	0.254	0.811	0.29	0.4	-	-	2	0	100%	1
4TOG_MPD_B_203	80%	88%	0.092	0.939	0.37	0.31	-	-	1	0	100%	1
4TOF_MPD_A_204	53%	73%	0.127	0.887	0.45	0.59	-	-	1	0	100%	1
6NLG_MPD_D_203	28%	73%	0.219	0.87	0.32	0.73	-	-	1	0	100%	1
9D77_MPD_A_505	100%	87%	0.032	0.998	0.16	0.52	-	-	1	0	100%	1
9H8Q_MPD_B_602	100%	82%	0.039	0.988	0.35	0.44	-	-	3	0	100%	1
9I7H_MPD_B_101	100%	69%	0.041	0.987	0.27	0.92	-	-	3	0	100%	1
9MMI_MPD_B_301	100%	79%	0.04	0.983	0.3	0.56	-	-	4	0	100%	1
7Z6B_MPD_B_307	99%	74%	0.057	0.986	0.42	0.59	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.