PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 5DB5 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5DB5_PLP_A_501 | 84% | 26% | 0.087 | 0.949 | 1.42 | 1.57 | 1 | 4 | 1 | 0 | 100% | 1 |
| 5DB5_PLP_B_501 | 78% | 24% | 0.1 | 0.943 | 1.47 | 1.63 | 1 | 4 | 0 | 0 | 100% | 1 |
| 1C0N_PLP_A_500 | 100% | 39% | 0.037 | 0.992 | 1.29 | 1.08 | 1 | 3 | 0 | 0 | 100% | 1 |
| 1JF9_PLP_A_500 | 100% | 12% | 0.047 | 0.994 | 1.28 | 2.78 | 1 | 11 | 0 | 0 | 100% | 1 |
| 1KMK_PLP_A_500 | 99% | 5% | 0.061 | 0.99 | 1.82 | 3.48 | 4 | 12 | 0 | 0 | 100% | 1 |
| 1KMJ_PLP_A_500 | 98% | 9% | 0.067 | 0.988 | 1.43 | 2.92 | 2 | 9 | 0 | 0 | 100% | 1 |
| 7RUJ_PLP_A_502 | 91% | 52% | 0.097 | 0.984 | 0.88 | 0.96 | - | 1 | 0 | 0 | 100% | 1 |
| 2BIE_PLP_A_1361 | 100% | 38% | 0.024 | 0.996 | 1.23 | 1.19 | 1 | 3 | 1 | 0 | 100% | 1 |
| 2X3L_PLP_A_1211 | 100% | 19% | 0.024 | 0.995 | 1.74 | 1.73 | 2 | 2 | 1 | 0 | 100% | 1 |
| 3CEJ_PLP_A_832 | 100% | 41% | 0.021 | 0.998 | 1.23 | 1.05 | 1 | 2 | 8 | 0 | 100% | 1 |
| 3CEM_PLP_A_832 | 100% | 41% | 0.021 | 0.997 | 1.24 | 1.04 | 2 | 2 | 1 | 0 | 100% | 1 |
| 4PPM_PLP_A_902 | 100% | 7% | 0.019 | 0.998 | 2.88 | 1.91 | 9 | 6 | 0 | 0 | 100% | 1 |
