Ligand validation:5ER9

UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 5ER9 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5ER9_UDP_B_501	93%	31%	0.078	0.971	1.7	1.08	5	2	0	0	100%	1
5ER9_UDP_A_501	48%	29%	0.155	0.899	1.72	1.16	3	3	4	0	100%	0.65
5EQD_UDP_B_501	92%	30%	0.088	0.98	1.69	1.1	4	2	0	0	100%	1
8X3Q_UDP_C_401	100%	3%	0.015	0.998	3.32	2.69	13	13	0	0	100%	1
8X3U_UDP_B_401	100%	3%	0.012	0.999	3.31	2.68	13	13	2	0	100%	1
8VH8_UDP_C_704	100%	62%	0.032	0.995	0.55	0.9	-	1	0	0	100%	1
2B69_UDP_A_900	100%	42%	0.032	0.992	1.03	1.21	2	4	0	0	100%	1
3H4T_UDP_A_604	100%	42%	0.039	0.99	1.01	1.22	2	3	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.