NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE
NAD is a Ligand Of Interest in 5JYD designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5JYD_NAD_D_901 | 97% | 61% | 0.06 | 0.978 | 0.67 | 0.82 | 1 | 1 | 0 | 0 | 100% | 1 |
| 5JYD_NAD_C_901 | 96% | 61% | 0.065 | 0.974 | 0.7 | 0.79 | - | - | 0 | 0 | 100% | 1 |
| 5JYD_NAD_E_901 | 82% | 65% | 0.1 | 0.955 | 0.64 | 0.7 | - | 1 | 0 | 0 | 100% | 1 |
| 5JYD_NAD_G_901 | 81% | 66% | 0.101 | 0.952 | 0.59 | 0.72 | - | 1 | 0 | 0 | 100% | 1 |
| 5JYD_NAD_B_901 | 78% | 65% | 0.106 | 0.947 | 0.61 | 0.72 | - | 1 | 0 | 0 | 100% | 1 |
| 5JYD_NAD_H_901 | 72% | 66% | 0.112 | 0.937 | 0.54 | 0.75 | - | 1 | 0 | 0 | 100% | 1 |
| 5JYD_NAD_A_901 | 62% | 63% | 0.135 | 0.927 | 0.68 | 0.74 | - | 3 | 0 | 0 | 100% | 1 |
| 5JYD_NAD_F_901 | 51% | 68% | 0.147 | 0.901 | 0.57 | 0.68 | - | 1 | 2 | 0 | 100% | 1 |
| 5U8P_NAD_B_400 | 98% | 66% | 0.065 | 0.989 | 0.56 | 0.74 | - | 1 | 0 | 0 | 100% | 1 |
| 2O2Y_NAD_B_1450 | 100% | 23% | 0.024 | 0.995 | 1.79 | 1.4 | 5 | 3 | 1 | 0 | 100% | 1 |
| 3CMC_NAD_R_408 | 100% | 20% | 0.016 | 0.998 | 1.63 | 1.74 | 4 | 9 | 0 | 0 | 100% | 1 |
| 4RQU_NAD_B_403 | 100% | 3% | 0.019 | 0.997 | 3.51 | 2.61 | 13 | 18 | 0 | 0 | 100% | 1 |
| 2BJK_NAD_A_1517 | 100% | 59% | 0.025 | 0.995 | 0.72 | 0.86 | - | 1 | 1 | 0 | 100% | 0.86 |
| 3EC7_NAD_A_400 | 100% | 18% | 0.025 | 0.995 | 1.8 | 1.74 | 5 | 8 | 1 | 0 | 100% | 1 |
