NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE
NAD is a Ligand Of Interest in 5VLD designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5VLD_NAD_F_502 | 80% | 25% | 0.119 | 0.969 | 1.12 | 1.9 | 3 | 10 | 2 | 0 | 100% | 1 |
5VLD_NAD_A_502 | 74% | 36% | 0.144 | 0.976 | 0.93 | 1.57 | - | 7 | 1 | 0 | 100% | 1 |
5VLD_NAD_E_503 | 67% | 23% | 0.142 | 0.951 | 1.44 | 1.74 | 4 | 12 | 2 | 0 | 100% | 1 |
5VLD_NAD_B_503 | 43% | 30% | 0.189 | 0.914 | 0.97 | 1.79 | 3 | 12 | 4 | 0 | 100% | 1 |
5VLD_NAD_D_503 | 43% | 31% | 0.192 | 0.915 | 1.09 | 1.63 | 4 | 9 | 2 | 0 | 100% | 1 |
5VLD_NAD_C_503 | 36% | 30% | 0.193 | 0.887 | 0.88 | 1.88 | 2 | 12 | 0 | 0 | 100% | 1 |
2O2Y_NAD_B_1450 | 100% | 23% | 0.024 | 0.995 | 1.79 | 1.4 | 5 | 3 | 1 | 0 | 100% | 1 |
3CMC_NAD_R_408 | 100% | 20% | 0.016 | 0.998 | 1.63 | 1.74 | 4 | 9 | 0 | 0 | 100% | 1 |
4RQU_NAD_B_403 | 100% | 3% | 0.019 | 0.997 | 3.51 | 2.61 | 13 | 18 | 0 | 0 | 100% | 1 |
2BJK_NAD_A_1517 | 100% | 59% | 0.025 | 0.995 | 0.72 | 0.86 | - | 1 | 1 | 0 | 100% | 0.86 |
3EC7_NAD_A_400 | 100% | 18% | 0.025 | 0.995 | 1.8 | 1.74 | 5 | 8 | 1 | 0 | 100% | 1 |