5Y3M | pdb_00005y3m


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5Y3M designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5Y3M_NAG_B_1000 50% 60% 0.171 0.9210.43 1.09 - 100100%1
5Y3M_NAG_A_1002 45% 67% 0.19 0.9240.37 0.87 - -00100%1
5Y3M_NAG_A_1000 44% 52% 0.181 0.9080.48 1.36 - 200100%1
5Y3M_NAG_A_1001 33% 70% 0.218 0.8990.31 0.84 - -00100%1
5Y3M_NAG_B_1004 27% 69% 0.213 0.8580.37 0.82 - -00100%1
5Y3M_NAG_B_1003 24% 66% 0.248 0.8770.32 0.96 - 100100%1
5Y3M_NAG_A_1004 19% 59% 0.251 0.8440.52 1.03 - 100100%1
5Y3M_NAG_A_1003 18% 63% 0.298 0.8890.38 1.02 - -00100%1
5Y3M_NAG_B_1002 18% 69% 0.224 0.8110.31 0.86 - -00100%1
5Y3M_NAG_B_1001 8% 62% 0.356 0.8240.44 0.99 - 100100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1