PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 5YD2 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5YD2_PLP_A_402 | 76% | 7% | 0.127 | 0.963 | 2.34 | 2.52 | 3 | 6 | 1 | 0 | 100% | 1 |
| 5YD2_PLP_B_402 | 71% | 7% | 0.13 | 0.95 | 2.95 | 1.99 | 3 | 6 | 1 | 0 | 100% | 1 |
| 5YB0_PLP_C_401 | 100% | 10% | 0.036 | 0.993 | 2.75 | 1.58 | 3 | 5 | 3 | 0 | 100% | 1 |
| 2BIE_PLP_A_1361 | 100% | 38% | 0.024 | 0.996 | 1.23 | 1.19 | 1 | 3 | 1 | 0 | 100% | 1 |
| 2X3L_PLP_A_1211 | 100% | 19% | 0.024 | 0.995 | 1.74 | 1.73 | 2 | 2 | 1 | 0 | 100% | 1 |
| 3CEJ_PLP_A_832 | 100% | 41% | 0.021 | 0.998 | 1.23 | 1.05 | 1 | 2 | 8 | 0 | 100% | 1 |
| 3CEM_PLP_A_832 | 100% | 41% | 0.021 | 0.997 | 1.24 | 1.04 | 2 | 2 | 1 | 0 | 100% | 1 |
| 4PPM_PLP_A_902 | 100% | 7% | 0.019 | 0.998 | 2.88 | 1.91 | 9 | 6 | 0 | 0 | 100% | 1 |
