UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 8YH1 designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
8YH1_UDP_A_302 | 78% | 70% | 0.099 | 0.942 | 0.43 | 0.72 | - | 1 | 1 | 0 | 100% | 1 |
8YH1_UDP_I_301 | 53% | 70% | 0.149 | 0.909 | 0.38 | 0.78 | - | 2 | 3 | 0 | 100% | 0.81 |
8YH1_UDP_C_302 | 38% | 77% | 0.177 | 0.879 | 0.48 | 0.45 | - | - | 1 | 0 | 100% | 0.83 |
8YH1_UDP_B_302 | 29% | 76% | 0.212 | 0.873 | 0.49 | 0.46 | - | - | 4 | 0 | 100% | 0.77 |
8YH1_UDP_D_302 | 8% | 70% | 0.327 | 0.794 | 0.52 | 0.64 | - | - | 3 | 0 | 100% | 0.74 |
8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
2B69_UDP_A_900 | 100% | 42% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
3H4T_UDP_A_604 | 100% | 42% | 0.039 | 0.99 | 1.01 | 1.22 | 2 | 3 | 0 | 0 | 100% | 1 |