2JAY | pdb_00002jay

Proteasome beta subunit PrcB from Mycobacterium tuberculosis

PDB DOI: https://doi.org/10.2210/pdb2JAY/pdb

Classification: HYDROLASE
Organism(s): Mycobacterium tuberculosis H37Rv
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2006-11-30 Released: 2008-02-05
Deposition Author(s): Oberschall, A., Strizhov, N., Bartunik, H.D.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.99 Å
R-Value Free:
0.268 (Depositor), 0.270 (DCC)
R-Value Work:
0.209 (Depositor), 0.260 (DCC)
R-Value Observed:
0.212 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.3 of the entry. See complete history.

Literature

Crystal Structure of Proteasome Beta Subunit Prcb from Mycobacterium Tuberculosis

Oberschall, A., Strizhov, N., Bartunik, H.D.

To be published.

Macromolecule Content

Total Structure Weight: 30.33 kDa
Atom Count: 1,497
Modeled Residue Count: 193
Deposited Residue Count: 291
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
PROTEASOME	A	291	Mycobacterium tuberculosis H37Rv	Mutation(s): 0 EC: 3.4.25.1
UniProt
Find proteins for P9WHT9 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore P9WHT9 Go to UniProtKB: P9WHT9
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P9WHT9
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.99 Å
R-Value Free: 0.268 (Depositor), 0.270 (DCC)
R-Value Work: 0.209 (Depositor), 0.260 (DCC)
R-Value Observed: 0.212 (Depositor)

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 40.504	α = 90
b = 40.473	β = 97.71
c = 59.937	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
DENZO	data reduction
SCALEPACK	data scaling
MOLREP	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2008-02-05

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2008-02-05
Type: Initial release
Version 1.1: 2011-05-08
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2023-12-13
Changes: Data collection, Database references, Other, Refinement description

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.