8K74 | pdb_00008k74

A novel monooxygenase

PDB DOI: https://doi.org/10.2210/pdb8K74/pdb

Classification: OXIDOREDUCTASE
Organism(s): Klebsiella sp. PCX
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2023-07-26 Released: 2024-07-31
Deposition Author(s): Ma, D., Feng, R.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.97 Å
R-Value Free:
0.222 (Depositor), 0.230 (DCC)
R-Value Work:
0.183 (Depositor), 0.190 (DCC)
R-Value Observed:
0.185 (Depositor)

Starting Model: in silico
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wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Functional and structural analysis of monooxygenase in polyacrylamide degraded by Klebsiella sp. PCX

Feng, R., Ma, D.

To be published.

Macromolecule Content

Total Structure Weight: 71.64 kDa
Atom Count: 5,199
Modeled Residue Count: 652
Deposited Residue Count: 656
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Alkanal monooxygenase alpha chain	A, B	328	Klebsiella sp. PCX	Mutation(s): 0 Gene Names: luxA_2, SB00610_04961 EC: 1.14.14.3
UniProt
Find proteins for A0A2A5MQ98 (Klebsiella quasipneumoniae) Explore A0A2A5MQ98 Go to UniProtKB: A0A2A5MQ98
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A2A5MQ98
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.97 Å
R-Value Free: 0.222 (Depositor), 0.230 (DCC)
R-Value Work: 0.183 (Depositor), 0.190 (DCC)
R-Value Observed: 0.185 (Depositor)

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 73.235	α = 90
b = 59.614	β = 98.84
c = 79.715	γ = 90

Software Package:

Software Name	Purpose
HKL-3000	data scaling
REFMAC	refinement
PDB_EXTRACT	data extraction
HKL-3000	data reduction
PHASER	phasing

Structure Validation

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Entry History & Funding Information

Deposition Data

Released Date: 2024-07-31

Deposition Author(s):

Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	32101371

Revision History (Full details and data files)

Version 1.0: 2024-07-31
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.