8Z0O | pdb_00008z0o

Cryo-EM structure of chitin synthase


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.20 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Chitin Translocation Is Functionally Coupled with Synthesis in Chitin Synthase.

Niu, S.Qi, L.Zhang, X.He, D.Li, P.Wang, H.Bi, Y.

(2024) Int J Mol Sci 25

  • DOI: https://doi.org/10.3390/ijms252111667
  • Primary Citation of Related Structures:  
    8K52, 8Z0O

  • PubMed Abstract: 

    Chitin, an extracellular polysaccharide, is synthesized by membrane-embedded chitin synthase (CHS) utilizing intracellular substrates. The mechanism of the translocation of synthesized chitin across the membrane to extracellular locations remains unresolved. We prove that the chitin synthase from Phytophthora sojae ( Ps CHS) is a processive glycosyltransferase, which can rapidly produce and tightly bind with the highly polymerized chitin. We further demonstrate that Ps CHS is a bifunctional enzyme, which is necessary and sufficient to translocate the synthesized chitin. Ps CHS was purified and then reconstituted into proteoliposomes (PLs). The nascent chitin is generated and protected from chitinase degradation unless detergent solubilizes the PLs, showing that Ps CHS translocates the newly produced chitin into the lumen of the PLs. We also attempted to resolve the Ps CHS structure of the synthesized chitin-bound state, although it was not successful; the obtained high-resolution structure of the UDP/Mn 2+ -bound state could still assist in describing the characterization of the Ps CHS's transmembrane channel. Consistently, we demonstrate that Ps CHS is indispensable and capable of translocating chitin in a process that is tightly coupled to chitin synthesis.


  • Organizational Affiliation
    • CAS and Shandong Province Key Laboratory of Experimental Marine Biology, Center for Ocean Mega-Science, Institute of Oceanology, Chinese Academy of Sciences, Qingdao 266071, China.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
chitin synthase
A, B
925Phytophthora sojae strain P6497Mutation(s): 0 
Gene Names: PHYSODRAFT_557500
EC: 2.4.1.16
Membrane Entity: Yes 
UniProt
Find proteins for G4Z2L3 (Phytophthora sojae (strain P6497))
Explore G4Z2L3 
Go to UniProtKB:  G4Z2L3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupG4Z2L3
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.20 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Other government--

Revision History  (Full details and data files)

  • Version 1.0: 2024-12-04
    Type: Initial release
  • Version 1.1: 2025-07-23
    Changes: Data collection