9B3R | pdb_00009b3r

The structure of human cardiac F-actin


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.50 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

The hypertrophic cardiomyopathy-associated A331P actin variant enhances basal contractile activity and elicits resting muscle dysfunction.

Doran, M.H.Rynkiewicz, M.J.Despond, E.Viswanathan, M.C.Madan, A.Chitre, K.Fenwick, A.J.Sousa, D.Lehman, W.Dawson, J.F.Cammarato, A.

(2025) iScience 28: 111816-111816

  • DOI: https://doi.org/10.1016/j.isci.2025.111816
  • Primary Citation of Related Structures:  
    9B3R

  • PubMed Abstract: 

    Previous studies aimed at defining the mechanistic basis of hypertrophic cardiomyopathy caused by A331P cardiac actin have reported conflicting results. The mutation is located along an actin surface strand, proximal to residues that interact with tropomyosin. These F-actin-tropomyosin associations are vital for proper contractile inhibition. To help resolve disease pathogenesis, we implemented a multidisciplinary approach. Transgenic Drosophila , expressing A331P actin, displayed skeletal muscle hypercontraction and elevated basal myocardial activity. A331P thin filaments, reconstituted using recombinant human cardiac actin, exhibited higher in vitro myosin-based sliding speeds, exclusively at low Ca 2+ concentrations. Cryo-EM-based reconstructions revealed no detectable A331P-related structural perturbations in F-actin. In silico , however, the P331-containing actin surface strand was less mobile and established diminished van der Waal's attractive forces with tropomyosin, which correlated with greater variability in inhibitory tropomyosin positioning. Such mutation-induced effects potentially elevate resting contractile activity among our models and may stimulate pathology in patients.


  • Organizational Affiliation
    • Department of Pharmacology, Physiology & Biophysics, Boston University Chobanian & Avedisian School of Medicine, 72 E. Concord St, Boston, MA 02118, USA.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Actin, alpha cardiac muscle 1A,
B [auth D],
C [auth E]
377Homo sapiensMutation(s): 0 
Gene Names: ACTC1ACTC
EC: 3.6.4
UniProt & NIH Common Fund Data Resources
Find proteins for P68032 (Homo sapiens)
Explore P68032 
Go to UniProtKB:  P68032
PHAROS:  P68032
GTEx:  ENSG00000159251 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP68032
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.50 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI)United States1R56HL124091-01
National Institutes of Health/National Heart, Lung, and Blood Institute (NIH/NHLBI)United States5R01HL036153-33

Revision History  (Full details and data files)

  • Version 1.0: 2024-05-29
    Type: Initial release
  • Version 1.1: 2025-05-14
    Changes: Data collection, Structure summary
  • Version 1.2: 2025-06-11
    Changes: Data collection, Database references