9JK3 | pdb_00009jk3

putative MgE2P of TMEM94


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.45 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structural analysis of full-length human transmembrane protein 94 argues against its classification as a P-type Mg 2+ ATPase.

Li, Y.Cong, Y.Lou, X.Li, W.Wang, R.Gong, M.Xiao, J.Qian, D.Yan, C.Gong, D.

(2025) Cell Discov 11: 54-54

  • DOI: https://doi.org/10.1038/s41421-025-00806-z
  • Primary Citation of Related Structures:  
    9JJK, 9JJN, 9JJO, 9JK3, 9JK4, 9JK5

  • Organizational Affiliation
    • State Key Laboratory of Medicinal Chemical Biology and College of Life Sciences, Nankai University, Tianjin, China.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Endoplasmic reticulum magnesium-transporting P-type ATPase1,394Homo sapiensMutation(s): 0 
Gene Names: TMEM94KIAA0195
EC: 7.2.2.14
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for Q12767 (Homo sapiens)
Explore Q12767 
Go to UniProtKB:  Q12767
PHAROS:  Q12767
GTEx:  ENSG00000177728 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ12767
Glycosylation
Glycosylation Sites: 2Go to GlyGen: Q12767-1
Sequence Annotations
Expand
  • Reference Sequence
Oligosaccharides

Help

Entity ID: 2
MoleculeChains Length2D Diagram Glycosylation3D Interactions
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
B, C
2N-Glycosylation
Glycosylation Resources
GlyTouCan:  G42666HT
GlyCosmos:  G42666HT
GlyGen:  G42666HT
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
POV (Subject of Investigation/LOI)
Query on POV

Download Ideal Coordinates CCD File 
D [auth A](2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate
C42 H82 N O8 P
WTJKGGKOPKCXLL-PFDVCBLKSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.45 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX1.20.1_4487:

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data

  • Released Date: 2025-06-11 
  • Deposition Author(s): Gong, D.S.

Funding OrganizationLocationGrant Number
Not funded--

Revision History  (Full details and data files)

  • Version 1.0: 2025-06-11
    Type: Initial release