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 9XCV | pdb_00009xcv

Cryo-EM structure of SmcE, a peptidase-domain containing ABC Transporter, with substrate and ATP


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.31 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report

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This is version 1.0 of the entry. See complete history. 

Literature

Cryo-EM structure of SmcE, a peptidase-domain containing ABC Transporter, with substrate and ATP

Gan, B.K., Luo, M.

To be published.

Macromolecule Content 

  • Total Structure Weight: 160.19 kDa 
  • Atom Count: 8,378 
  • Modeled Residue Count: 1,071 
  • Deposited Residue Count: 1,427 
  • Unique protein chains: 2

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Peptidase domain-containing ABC transporter
A, B
707Serratia marcescensMutation(s): 0 
Gene Names: DKC05_11230
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations
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Reference Sequence
Find similar proteins by:  Sequence   |   3D Structure  
Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
substrateC [auth F]13Serratia marcescensMutation(s): 0 
Sequence Annotations
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Reference Sequence

Small Molecules

Non-standard Monomers  1 Unique
IDChains TypeFormula2D Diagram
UNK
Query on UNK
L-PEPTIDE LINKINGC4 H9 N O2

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.31 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX1.19.2_4158
RECONSTRUCTIONcryoSPARC

Structure Validation

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Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Ministry of Education (MoE, Singapore)Singapore--

Revision History  (Full details and data files)

  • Version 1.0: 2026-10-28
    Type: Initial release