Cryo-EM structure of SmcE, a peptidase-domain containing ABC Transporter, with substrate and ATP
Gan, B.K., Luo, M.To be published.
Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
Macromolecule Content 
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Peptidase domain-containing ABC transporter | 707 | Serratia marcescens | Mutation(s): 0  Gene Names: DKC05_11230 | ![]() | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| substrate | C [auth F] | 13 | Serratia marcescens | Mutation(s): 0  | ![]() |
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| AV0 Download:Ideal Coordinates CCD File | D [auth A], H [auth B] | Lauryl Maltose Neopentyl Glycol C47 H88 O22 MADJBYLAYPCCOO-VWHTXWAPSA-N | |||
| ATP Download:Ideal Coordinates CCD File | E [auth A], G [auth B] | ADENOSINE-5'-TRIPHOSPHATE C10 H16 N5 O13 P3 ZKHQWZAMYRWXGA-KQYNXXCUSA-N | |||
| MG Download:Ideal Coordinates CCD File | F [auth A], I [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N | |||
| Non-standard Monomers 1 Unique | ||||
|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram |
| UNK Query on UNK | L-PEPTIDE LINKING | C4 H9 N O2 | ||
| Task | Software Package | Version |
|---|---|---|
| MODEL REFINEMENT | PHENIX | 1.19.2_4158 |
| RECONSTRUCTION | cryoSPARC |
| Funding Organization | Location | Grant Number |
|---|---|---|
| Ministry of Education (MoE, Singapore) | Singapore | -- |