8ZZ2 | pdb_00008zz2

Structure of Saccharomyces cerevisiae exosome determined with CX-MS


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Dis3
Rrp45
Rrp4
Csl4
Mtr3
Rrp40
Rrp42
Ski6
Rrp46_gfp
Rrp43
Lrp1
Rrp6
MPP6

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR050180RNR RibonucleaseFamily
IPR041505Dis3-like cold-shock domain 2Domain
IPR003029S1 domainDomain
IPR022966Ribonuclease II/R, conserved siteConserved Site
IPR033770Exosome complex exonuclease RRP44, S1 domainDomain
IPR033771Rrp44-like cold shock domainDomain
IPR002716PIN domainDomain
IPR001900Ribonuclease II/RDomain
IPR029060PIN-like domain superfamilyHomologous Superfamily
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR033100Exosome complex component RRP45Family
IPR027408PNPase/RNase PH domain superfamilyHomologous Superfamily
IPR001247Exoribonuclease, phosphorolytic domain 1Domain
IPR050590Exosome complex component Rrp42 subfamilyFamily
IPR036345Exoribonuclease, PH domain 2 superfamilyHomologous Superfamily
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IPR015847Exoribonuclease, phosphorolytic domain 2Domain
IPR048565RRP4, S1 domainDomain
IPR036612K Homology domain, type 1 superfamilyHomologous Superfamily
IPR025721Exosome complex component, N-terminal domainDomain
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR026699Exosome complex RNA-binding protein 1/RRP40/RRP4Family
IPR004088K Homology domain, type 1Domain
IPR019495Exosome complex component CSL4, C-terminalDomain
IPR039771Exosome complex component Csl4Family
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR048626Exosome complex component CSL4, N-terminal domainDomain
IPR050080Ribonuclease PHFamily
IPR027408PNPase/RNase PH domain superfamilyHomologous Superfamily
IPR001247Exoribonuclease, phosphorolytic domain 1Domain
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IPR041054Exosome complex exonuclease Rrp40, N-terminal domain, eukaryotesDomain
IPR049469Exosome complex component RRP40, type I KH domainDomain
IPR037319Rrp40, S1 domainDomain
IPR036612K Homology domain, type 1 superfamilyHomologous Superfamily
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR026699Exosome complex RNA-binding protein 1/RRP40/RRP4Family
IPR004088K Homology domain, type 1Domain
IPR027408PNPase/RNase PH domain superfamilyHomologous Superfamily
IPR050590Exosome complex component Rrp42 subfamilyFamily
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IPR050080Ribonuclease PHFamily
IPR027408PNPase/RNase PH domain superfamilyHomologous Superfamily
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IPR015847Exoribonuclease, phosphorolytic domain 2Domain
IPR001247Exoribonuclease, phosphorolytic domain 1Domain
IPR036345Exoribonuclease, PH domain 2 superfamilyHomologous Superfamily
IPR050080Ribonuclease PHFamily
IPR027408PNPase/RNase PH domain superfamilyHomologous Superfamily
IPR001247Exoribonuclease, phosphorolytic domain 1Domain
IPR036345Exoribonuclease, PH domain 2 superfamilyHomologous Superfamily
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IPR015847Exoribonuclease, phosphorolytic domain 2Domain
IPR027408PNPase/RNase PH domain superfamilyHomologous Superfamily
IPR050590Exosome complex component Rrp42 subfamilyFamily
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IPR001247Exoribonuclease, phosphorolytic domain 1Domain
IPR011082Exosome-associated factor Rrp47/DNA strand repair C1DFamily
IPR007146Sas10/Utp3/C1DFamily
IPR036397Ribonuclease H superfamilyHomologous Superfamily
IPR002121HRDC domainDomain
IPR012588Exosome-associated factor Rrp6, N-terminalDomain
IPR012337Ribonuclease H-like superfamilyHomologous Superfamily
IPR045092Exosome complex exonuclease Rrp6-likeFamily
IPR0025623'-5' exonuclease domainDomain
IPR049559Rrp6-like, 3'-5' exonuclease domainDomain
IPR010997HRDC-like superfamilyHomologous Superfamily
IPR044876HRDC domain superfamilyHomologous Superfamily