9GFO | pdb_00009gfo

iASPP-CTD fusion to p63 peptide

X-RAY DIFFRACTION

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Starting Model(s)

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	2VGE

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP		293	2 M sodium formate and 0.1 M TRIS pH 7.5

Crystal Properties
Matthews coefficient	Solvent content
3.58	65.61

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 77.119	α = 90
b = 94.12	β = 90
c = 179.314	γ = 90

Symmetry
Space Group	P 2 21 2

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	PIXEL	DECTRIS EIGER2 X 16M		2015-08-18	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	SLS BEAMLINE X06SA	1	SLS	X06SA

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.4	47.244	99.9	0.066	13.4	6.7		51860

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	2.4	2.47	100		0.2135

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	FREE R-VALUE	2.4	47.244	51860	2550	99.904	0.245	0.2428	0.2432	0.2796	0.2779	69.485

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.435			2.755		-2.32

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_2_deg	31.697
r_dihedral_angle_4_deg	18.191
r_dihedral_angle_3_deg	17.651
r_lrange_it	13.112
r_lrange_other	13.111
r_scangle_it	9.636
r_scangle_other	9.636
r_mcangle_it	9.577
r_mcangle_other	9.575
r_dihedral_angle_1_deg	7.74
r_mcbond_it	6.408
r_mcbond_other	6.406
r_scbond_it	6.317
r_scbond_other	6.317
r_angle_other_deg	1.163
r_angle_refined_deg	1.159
r_symmetry_xyhbond_nbd_refined	0.346
r_nbd_other	0.261
r_nbd_refined	0.213
r_symmetry_nbd_other	0.187
r_nbtor_refined	0.162
r_symmetry_nbd_refined	0.161
r_xyhbond_nbd_other	0.15
r_xyhbond_nbd_refined	0.134
r_symmetry_nbtor_other	0.077
r_ncsr_local_group_4	0.072
r_ncsr_local_group_6	0.062
r_ncsr_local_group_2	0.061
r_ncsr_local_group_5	0.06
r_ncsr_local_group_3	0.054
r_ncsr_local_group_1	0.053
r_chiral_restr	0.044
r_bond_refined_d	0.007
r_gen_planes_refined	0.007
r_gen_planes_other	0.002
r_bond_other_d	0.001

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	6383
Nucleic Acid Atoms
Solvent Atoms	73
Heterogen Atoms

Software

Software
Software Name	Purpose
REFMAC	refinement
XDS	data reduction
SCALA	data scaling
PHASER	phasing